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Datasets Dashboard

Datasets are the most important resources we have gained and maintained. Different datasets have various subjects, features and outcomes.
Understand the datases by reading the datasets descriptions, data dictionaries and data workflows will always be the first step to start the research.

Datasets Statistics​

IDEALIST
Details

Surgical Patients admitted to UF Health (GNV+JAX)

Updated Time
2024/07/30
Time Range
2012/01/01 - 2021/04/30
Num of patients
115,954
Num of encounters
156,564
Number of surgeries
232,805
OMOP version
Enabled
AKI EPIC 2
Details

Hospitalized Patients admitted to UF Health (GNV)

Updated Time
2019/10/15
Time Range
2012/01/01-2019/08/22
Num of patients
156,699
Num of encounters
529,032
Number of surgeries
221,083
OMOP version
Disabled
UF INPATIENT DATABASE
Details

Hospitalized Patients admitted to UF Health (All Sites)

Updated Time
2024/06/07
Time Range
2012/01/01-2023/12/31
Num of patients
191,404
Num of encounters
285,339
Number of surgeries
636,907
OMOP version
Enabled
ChoRUS
Details

Selected ICU Patients from Inpatient Database

Updated Time
2024/07/30
Time Range
Dynamic selection
Num of patients
4,000
Num of encounters
5,123
Number of surgeries
N/A
OMOP version
Enabled

Datasets Workflow​

IC3 data core takes the responsibility to manage the data collected from UF-IDR(Integrated Data Registry). All data will be processed and stored with below brief workflow.

Researchers are recommended to query the structured databases and download the sub-cohort for each project.
Please feel free to contact with IC3 data core about any datasets problems.

Overall Data Workflow

Datasets Core Concepts​

Please read the key concepts of the datasets before stepping into the data.

Datasets Plan​

  • 2022-11-01 : IDEALIST OMOP database is ready for internal usage.
  • 2023-02-20 : Finish the OMOP mapping of Multimodal AI datasets
  • 2023-09-30 : External Dataset OMOPatization: Start MIMIC V OMOP testing
  • 2023-10-20 : Start testing Auditing and Data Quality Control tools
  • 2023-11-10 : Inpatient database (EHR) is ready for internal usage
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To get updates about OMOP mapping, please refer to here